Feature identity
- Identifier
- Pa03g3977.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,365 bp
- Genomic location
- Pa03:85,967,335–85,973,493
- Strand
- +
West Indian T2T · mRNA
Pa03g3977.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,365
- bp
- Pa03:85,967,335–85,973,493
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa03g3977
- eggNOG
- Preferred name: TGA10 | Seed ortholog: 337451.A0A443NH09 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|Pn-15
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa03g3977.1-protein
derives_frommRNAPa03g3977.1
mRNAPa03g3977.1
part_ofgenePa03g3977
exon
part_ofPa03g3977.1:1mRNAPa03g3977.1
exon
part_ofPa03g3977.1:10mRNAPa03g3977.1
exon
part_ofPa03g3977.1:11mRNAPa03g3977.1
exon
part_ofPa03g3977.1:2mRNAPa03g3977.1
exon
part_ofPa03g3977.1:3mRNAPa03g3977.1
exon
part_ofPa03g3977.1:4mRNAPa03g3977.1
exon
part_ofPa03g3977.1:5mRNAPa03g3977.1
exon
part_ofPa03g3977.1:6mRNAPa03g3977.1
exon
part_ofPa03g3977.1:7mRNAPa03g3977.1
exon
part_ofPa03g3977.1:8mRNAPa03g3977.1
exon
part_ofPa03g3977.1:9mRNAPa03g3977.1
CDS
part_ofPa03g3977.1:cdsmRNAPa03g3977.1
