Feature identity
- Identifier
- PaHa07g19540.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,380 bp
- Genomic location
- 7:57,706,263–57,722,580
- Strand
- +
Hass · mRNA
PaHa07g19540.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,380
- bp
- 7:57,706,263–57,722,580
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g19540
- eggNOG
- Preferred name: NTL8 | Seed ortholog: 337451.A0A443P3C8 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|bY-14, NAM@3398|AGu-18, NAM@35493|AE-6
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0009626 plant-type hypersensitive response; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009845 seed germination; GO:0009910 negative regulation of flower development; GO:0009938 negative regulation of gibberellic acid mediated signaling pathway; GO:0016020 membrane; GO:0033619 membrane protein proteolysis; GO:0034976 response to endoplasmic reticulum stress; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0048573 photoperiodism, flowering; GO:0071333 cellular response to glucose stimulus; GO:0071472 cellular response to salt stress; GO:2000039 regulation of trichome morphogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g19540.1-protein
derives_frommRNAPaHa07g19540.1
mRNAPaHa07g19540.1
part_ofgenePaHa07g19540
CDS
part_ofPaHa07g19540.1-CDS-7-1787993825:57706263..57706401mRNAPaHa07g19540.1
CDS
part_ofPaHa07g19540.1-CDS-7-1787993825:57711168..57711197mRNAPaHa07g19540.1
CDS
part_ofPaHa07g19540.1-CDS-7-1787993825:57711371..57711523mRNAPaHa07g19540.1
CDS
part_ofPaHa07g19540.1-CDS-7-1787993825:57714064..57714332mRNAPaHa07g19540.1
CDS
part_ofPaHa07g19540.1-CDS-7-1787993825:57720819..57721118mRNAPaHa07g19540.1
CDS
part_ofPaHa07g19540.1-CDS-7-1787993825:57722092..57722580mRNAPaHa07g19540.1
exon
part_ofPaHa07g19540.1-exon-7-1787993825:57706263..57706401mRNAPaHa07g19540.1
exon
part_ofPaHa07g19540.1-exon-7-1787993825:57711168..57711197mRNAPaHa07g19540.1
exon
part_ofPaHa07g19540.1-exon-7-1787993825:57711371..57711523mRNAPaHa07g19540.1
exon
part_ofPaHa07g19540.1-exon-7-1787993825:57714064..57714332mRNAPaHa07g19540.1
exon
part_ofPaHa07g19540.1-exon-7-1787993825:57720819..57721118mRNAPaHa07g19540.1
exon
part_ofPaHa07g19540.1-exon-7-1787993825:57722092..57722580mRNAPaHa07g19540.1
