Feature identity
- Identifier
- PaHa01g22790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 963 bp
- Genomic location
- 1:56,211,693–56,213,905
- Strand
- −
Hass · mRNA
PaHa01g22790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 963
- bp
- 1:56,211,693–56,213,905
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g22790
- eggNOG
- Preferred name: ACO1 | Seed ortholog: 337451.A0A443Q3U0 | COG: COG3491 | eggNOG OG: 2OG-FeII_Oxy@131567|C-2!, 2OG-FeII_Oxy@3193|Add-22, 2OG-FeII_Oxy@3398|EPz-29, 2OG-FeII_Oxy@35493|Fn-12, DIOX_N@2759|B-2!, DIOX_N@3193|AO-7, DIOX_N@3398|Up-14
- Gene Ontology
- GO:0005507 copper ion binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005783 endoplasmic reticulum; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0009505 plant-type cell wall; GO:0009506 plasmodesma; GO:0009620 response to fungus; GO:0009693 ethylene biosynthetic process; GO:0009727 detection of ethylene stimulus; GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity; GO:0010030 positive regulation of seed germination; GO:0010494 cytoplasmic stress granule; GO:0071398 cellular response to fatty acid; GO:0071732 cellular response to nitric oxide
- KEGG
- EC: ec:1.14.17.4 | KO: K05933 | Pathway: 00270, 01100, 01110 | Module: M00368 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g22790.1-protein
derives_frommRNAPaHa01g22790.1
mRNAPaHa01g22790.1
part_ofgenePaHa01g22790
CDS
part_ofPaHa01g22790.1-CDS-1-1787993825:56211693..56211986mRNAPaHa01g22790.1
CDS
part_ofPaHa01g22790.1-CDS-1-1787993825:56212513..56212852mRNAPaHa01g22790.1
CDS
part_ofPaHa01g22790.1-CDS-1-1787993825:56213324..56213547mRNAPaHa01g22790.1
CDS
part_ofPaHa01g22790.1-CDS-1-1787993825:56213801..56213905mRNAPaHa01g22790.1
exon
part_ofPaHa01g22790.1-exon-1-1787993825:56211693..56211986mRNAPaHa01g22790.1
exon
part_ofPaHa01g22790.1-exon-1-1787993825:56212513..56212852mRNAPaHa01g22790.1
exon
part_ofPaHa01g22790.1-exon-1-1787993825:56213324..56213547mRNAPaHa01g22790.1
exon
part_ofPaHa01g22790.1-exon-1-1787993825:56213801..56213905mRNAPaHa01g22790.1
