Feature identity
- Identifier
- Pa04g2998.3
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,107 bp
- Genomic location
- Pa04:57,364,072–57,371,859
- Strand
- +
West Indian T2T · mRNA
Pa04g2998.3
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,107
- bp
- Pa04:57,364,072–57,371,859
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa04g2998
- eggNOG
- Preferred name: TGA1 | Seed ortholog: 337451.A0A3S3QUL8 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|CF-9, bZIP_1@131567|B-2, bZIP_1@35493|AEr-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa04g2998.3-protein
derives_frommRNAPa04g2998.3
exon
part_ofPa04g2998.2:3mRNAPa04g2998.3
exon
part_ofPa04g2998.2:4mRNAPa04g2998.3
exon
part_ofPa04g2998.2:5mRNAPa04g2998.3
exon
part_ofPa04g2998.2:6mRNAPa04g2998.3
exon
part_ofPa04g2998.2:7mRNAPa04g2998.3
exon
part_ofPa04g2998.2:8mRNAPa04g2998.3
exon
part_ofPa04g2998.2:9mRNAPa04g2998.3
mRNAPa04g2998.3
part_ofgenePa04g2998
CDS
part_ofPa04g2998.3:cdsmRNAPa04g2998.3
exon
part_ofPa04g2998.4:11mRNAPa04g2998.3
