Feature identity
- Identifier
- Pa05g1164.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,461 bp
- Genomic location
- Pa05:36,307,626–36,320,079
- Strand
- +
West Indian T2T · mRNA
Pa05g1164.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,461
- bp
- Pa05:36,307,626–36,320,079
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g1164
- eggNOG
- Preferred name: TGA9 | Seed ortholog: 337451.A0A443NYH7 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|Iy-13, DOG1@3398|Tm-16, bZIP_1@131567|B-2, bZIP_1@3398|Cbu-32, bZIP_1@35493|AEs-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0002237 response to molecule of bacterial origin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0042803 protein homodimerization activity; GO:0048653 anther development; GO:0071588 hydrogen peroxide mediated signaling pathway
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g1164.1-protein
derives_frommRNAPa05g1164.1
mRNAPa05g1164.1
part_ofgenePa05g1164
exon
part_ofPa05g1164.1:1mRNAPa05g1164.1
exon
part_ofPa05g1164.1:10mRNAPa05g1164.1
exon
part_ofPa05g1164.1:11mRNAPa05g1164.1
exon
part_ofPa05g1164.1:12mRNAPa05g1164.1
exon
part_ofPa05g1164.1:2mRNAPa05g1164.1
exon
part_ofPa05g1164.1:3mRNAPa05g1164.1
exon
part_ofPa05g1164.1:4mRNAPa05g1164.1
exon
part_ofPa05g1164.1:5mRNAPa05g1164.1
exon
part_ofPa05g1164.1:6mRNAPa05g1164.1
exon
part_ofPa05g1164.1:7mRNAPa05g1164.1
exon
part_ofPa05g1164.1:8mRNAPa05g1164.1
exon
part_ofPa05g1164.1:9mRNAPa05g1164.1
CDS
part_ofPa05g1164.1:cdsmRNAPa05g1164.1
