Feature identity
- Identifier
- PaHa07g15670.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 432 bp
- Genomic location
- 7:36,021,028–36,032,523
- Strand
- +
Hass · mRNA
PaHa07g15670.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 432
- bp
- 7:36,021,028–36,032,523
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g15670
- eggNOG
- Preferred name: TIF3B1 | Seed ortholog: 59895.A0A103XEK6 | COG: COG0823 | eggNOG OG: RRM_1@131567|Gk-13, RRM_1@2759|hZ-20, RRM_1@4210|JFr-32, eIF2A@131567|C-2, eIF2A@4210|AkW-36
- Gene Ontology
- GO:0001732 formation of cytoplasmic translation initiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003313 heart rudiment development; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006396 RNA processing; GO:0006413 translational initiation; GO:0006446 regulation of translational initiation; GO:0008150 biological_process; GO:0009536 plastid; GO:0009847 spore germination; GO:0010608 post-transcriptional regulation of gene expression; GO:0014032 neural crest cell development; GO:0030707 follicle cell of egg chamber development; GO:0071466 cellular response to xenobiotic stimulus; GO:0075522 IRES-dependent viral translational initiation; GO:0075525 viral translational termination-reinitiation
- KEGG
- KO: K03253 | BRITE: 00001, 03012, 03019
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g15670.1-protein
derives_frommRNAPaHa07g15670.1
mRNAPaHa07g15670.1
part_ofgenePaHa07g15670
CDS
part_ofPaHa07g15670.1-CDS-7-1787993825:36021028..36021215mRNAPaHa07g15670.1
CDS
part_ofPaHa07g15670.1-CDS-7-1787993825:36021311..36021326mRNAPaHa07g15670.1
CDS
part_ofPaHa07g15670.1-CDS-7-1787993825:36021407..36021495mRNAPaHa07g15670.1
CDS
part_ofPaHa07g15670.1-CDS-7-1787993825:36021579..36021689mRNAPaHa07g15670.1
CDS
part_ofPaHa07g15670.1-CDS-7-1787993825:36032496..36032523mRNAPaHa07g15670.1
exon
part_ofPaHa07g15670.1-exon-7-1787993825:36021028..36021215mRNAPaHa07g15670.1
exon
part_ofPaHa07g15670.1-exon-7-1787993825:36021311..36021326mRNAPaHa07g15670.1
exon
part_ofPaHa07g15670.1-exon-7-1787993825:36021407..36021495mRNAPaHa07g15670.1
exon
part_ofPaHa07g15670.1-exon-7-1787993825:36021579..36021689mRNAPaHa07g15670.1
exon
part_ofPaHa07g15670.1-exon-7-1787993825:36032496..36032523mRNAPaHa07g15670.1
