Feature identity
- Identifier
- Pa05g1543.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,278 bp
- Genomic location
- Pa05:48,247,316–48,257,785
- Strand
- +
West Indian T2T · mRNA
Pa05g1543.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,278
- bp
- Pa05:48,247,316–48,257,785
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g1543
- eggNOG
- Preferred name: NAC008 | Seed ortholog: 337451.A0A3S4NYF1 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|HY-10, NAM@3398|LV-11, NAM@35493|Z-5
- Gene Ontology
- GO:0000077 DNA damage checkpoint signaling; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010332 response to gamma radiation; GO:0040020 regulation of meiotic nuclear division
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g1543.1-protein
derives_frommRNAPa05g1543.1
mRNAPa05g1543.1
part_ofgenePa05g1543
exon
part_ofPa05g1543.1:7mRNAPa05g1543.1
CDS
part_ofPa05g1543.1:cdsmRNAPa05g1543.1
exon
part_ofPa05g1543.2:1mRNAPa05g1543.1
exon
part_ofPa05g1543.2:2mRNAPa05g1543.1
exon
part_ofPa05g1543.2:3mRNAPa05g1543.1
exon
part_ofPa05g1543.2:5mRNAPa05g1543.1
exon
part_ofPa05g1543.2:6mRNAPa05g1543.1
