Feature identity
- Identifier
- Pa05g1576.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,965 bp
- Genomic location
- Pa05:48,915,864–48,929,555
- Strand
- −
West Indian T2T · mRNA
Pa05g1576.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,965
- bp
- Pa05:48,915,864–48,929,555
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g1576
- eggNOG
- Preferred name: WRKY20 | Seed ortholog: 337451.A0A443NXK7 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|Uo-17, WRKY@3193|APp-24, WRKY@33090|AAb-22, WRKY@3398|Ahx-26
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K13424, K18835 | Pathway: 04016 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g1576.1-protein
derives_frommRNAPa05g1576.1
mRNAPa05g1576.1
part_ofgenePa05g1576
exon
part_ofPa05g1576.1:7mRNAPa05g1576.1
CDS
part_ofPa05g1576.1:cdsmRNAPa05g1576.1
exon
part_ofPa05g1576.2:1mRNAPa05g1576.1
exon
part_ofPa05g1576.2:3mRNAPa05g1576.1
exon
part_ofPa05g1576.2:4mRNAPa05g1576.1
exon
part_ofPa05g1576.2:5mRNAPa05g1576.1
exon
part_ofPa05g1576.2:6mRNAPa05g1576.1
