Feature identity
- Identifier
- Pa05g1955.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 669 bp
- Genomic location
- Pa05:55,234,799–55,242,938
- Strand
- −
West Indian T2T · mRNA
Pa05g1955.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 669
- bp
- Pa05:55,234,799–55,242,938
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g1955
- eggNOG
- Preferred name: LOC100831008, cyclin | Seed ortholog: 337451.A0A3S3P4U5, 337451.A0A443P032 | COG: S | eggNOG OG: Cyclin_C@3193|Au-9, Cyclin_C@33090|H-4, Cyclin_C@3398|CB-10, Cyclin_C@35493|X-6, Cyclin_N@131567|CM-9, Cyclin_N@2759|Id-12, Cyclin_N@33090|Aiy-23, Lipase_GDSL@131567|A-1, Lipase_GDSL@3193|pI-20, Lipase_GDSL@3398|vL-21, Lipase_GDSL@35493|SL-15
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006631 fatty acid metabolic process; GO:0008126 acetylesterase activity; GO:0009507 chloroplast; GO:0009744 response to sucrose; GO:0010440 stomatal lineage progression
- KEGG
- KO: K18810 | Pathway: 03022, 03420, 04068, 04115, 05206 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g1955.2-protein
derives_frommRNAPa05g1955.2
exon
part_ofPa05g1955.1:1mRNAPa05g1955.2
mRNAPa05g1955.2
part_ofgenePa05g1955
exon
part_ofPa05g1955.2:10mRNAPa05g1955.2
exon
part_ofPa05g1955.2:11mRNAPa05g1955.2
exon
part_ofPa05g1955.2:12mRNAPa05g1955.2
exon
part_ofPa05g1955.2:13mRNAPa05g1955.2
exon
part_ofPa05g1955.2:6mRNAPa05g1955.2
exon
part_ofPa05g1955.2:7mRNAPa05g1955.2
exon
part_ofPa05g1955.2:8mRNAPa05g1955.2
exon
part_ofPa05g1955.2:9mRNAPa05g1955.2
CDS
part_ofPa05g1955.2:cdsmRNAPa05g1955.2
