Pa05g1709.3

West Indian T2T · mRNA

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,855: bp
Pa05:51,165,400–51,193,040: genomic location

Record overview

Feature identity

Identifier: Pa05g1709.3
Feature type: mRNA
Genome collection: West Indian T2T
Organism: Persea americana-West Indian
Sequence length: 3,855 bp
Genomic location: Pa05:51,165,400–51,193,040
Strand: −

Open original Tripal record

Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa05g1709

eggNOG: Preferred name: KIN4C | Seed ortholog: 337451.A0A443NX98 | COG: S | eggNOG OG: Kinesin@131567|A-1*, Kinesin@2759|TX-12, Kinesin@3193|CrG-22
Gene Ontology: GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000278 mitotic cell cycle; GO:0000281 mitotic cytokinesis; GO:0003774 cytoskeletal motor activity; GO:0003777 microtubule motor activity; GO:0005119 smoothened binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0006996 organelle organization; GO:0007052 mitotic spindle organization; GO:0007059 chromosome segregation; GO:0007088 regulation of mitotic nuclear division; GO:0007110 meiosis I cytokinesis; GO:0007131 reciprocal meiotic recombination; GO:0007140 male meiotic nuclear division; GO:0007224 smoothened signaling pathway; GO:0007338 single fertilization; GO:0007476 imaginal disc-derived wing morphogenesis; GO:0008017 microtubule binding; GO:0008089 anterograde axonal transport; GO:0008574 plus-end-directed microtubule motor activity; GO:0009506 plasmodesma; GO:0009524 phragmoplast; GO:0010032 meiotic chromosome condensation; GO:0016321 female meiosis chromosome segregation; GO:0019901 protein kinase binding; GO:0030707 follicle cell of egg chamber development; GO:0031625 ubiquitin protein ligase binding; GO:0035591 signaling adaptor activity; GO:0042073 intraciliary transport; GO:0042981 regulation of apoptotic process; GO:0045879 negative regulation of smoothened signaling pathway; GO:0051231 spindle elongation; GO:0051256 mitotic spindle midzone assembly; GO:0051257 meiotic spindle midzone assembly; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:0090404 pollen tube tip; GO:0140313 molecular sequestering activity
KEGG: KO: K06227, K10393, K10395, K10396, K10397, K10405, K10406, K18806, K24186 | Pathway: 04144, 04341, 04814 | BRITE: 00001, 03036, 04131, 04147, 04812

Biological context