Feature identity
- Identifier
- Pa05g2578.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,230 bp
- Genomic location
- Pa05:63,839,525–63,845,328
- Strand
- −
West Indian T2T · mRNA
Pa05g2578.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,230
- bp
- Pa05:63,839,525–63,845,328
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g2578
- eggNOG
- Preferred name: COL9 | Seed ortholog: 337451.A0A3S3MF99 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@2759|t-6, CCT@3193|Ga-11, CCT@3398|Oi-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0048579 negative regulation of long-day photoperiodism, flowering
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g2578.1-protein
derives_frommRNAPa05g2578.1
mRNAPa05g2578.1
part_ofgenePa05g2578
exon
part_ofPa05g2578.1:1mRNAPa05g2578.1
exon
part_ofPa05g2578.1:2mRNAPa05g2578.1
exon
part_ofPa05g2578.1:3mRNAPa05g2578.1
exon
part_ofPa05g2578.1:4mRNAPa05g2578.1
CDS
part_ofPa05g2578.1:cdsmRNAPa05g2578.1
