Feature identity
- Identifier
- Pa05g2299.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,272 bp
- Genomic location
- Pa05:60,067,978–60,075,115
- Strand
- +
West Indian T2T · mRNA
Pa05g2299.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,272
- bp
- Pa05:60,067,978–60,075,115
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g2299
- eggNOG
- Preferred name: NAC008 | Seed ortholog: 337451.A0A443NW00 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|HX-10, NAM@3398|US-13, NAM@35493|Z-5
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010321 regulation of vegetative phase change; GO:0045893 positive regulation of DNA-templated transcription; GO:1905177 tracheary element differentiation; GO:2000652 regulation of secondary cell wall biogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g2299.2-protein
derives_frommRNAPa05g2299.2
mRNAPa05g2299.2
part_ofgenePa05g2299
exon
part_ofPa05g2299.2:1mRNAPa05g2299.2
exon
part_ofPa05g2299.2:2mRNAPa05g2299.2
exon
part_ofPa05g2299.2:3mRNAPa05g2299.2
exon
part_ofPa05g2299.2:4mRNAPa05g2299.2
exon
part_ofPa05g2299.2:5mRNAPa05g2299.2
exon
part_ofPa05g2299.2:6mRNAPa05g2299.2
CDS
part_ofPa05g2299.2:cdsmRNAPa05g2299.2
