Pa05g2330.1

West Indian T2T · mRNA

Pa05g2330.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,929
bp
Pa05:60,420,595–60,430,983
genomic location
Record overview

Feature identity

Identifier
Pa05g2330.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,929 bp
Genomic location
Pa05:60,420,595–60,430,983
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa05g2330

eggNOG
Preferred name: SSRP1 | Seed ortholog: 337451.A0A3S3NMJ5 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Og-14, POB3_N@131567|A-1, Rtt106@131567|A-1*, Rtt106@2759|b-5, SSrecog@2759|A-1
Gene Ontology
GO:0000741 karyogamy; GO:0000791 euchromatin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010197 polar nucleus fusion; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0035101 FACT complex
KEGG
EC: ec:2.1.1.354 | KO: K09272 | Pathway: 00310, 01100 | BRITE: 00001, 03000, 03036
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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