Feature identity
- Identifier
- PaHa07g14280.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,653 bp
- Genomic location
- 7:30,367,968–30,383,989
- Strand
- −
Hass · mRNA
PaHa07g14280.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,653
- bp
- 7:30,367,968–30,383,989
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g14280
- eggNOG
- Preferred name: BIM1 | Seed ortholog: 337451.A0A443P2E8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|CYB-25, HLH@33090|AAF-17, HLH@3398|BVK-22, HLH@35493|AMq-18
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042802 identical protein binding; GO:1902448 positive regulation of shade avoidance
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g14280.1-protein
derives_frommRNAPaHa07g14280.1
mRNAPaHa07g14280.1
part_ofgenePaHa07g14280
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30367968..30368078mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30372885..30373011mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30374295..30374746mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30375852..30375947mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30376045..30376114mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30378872..30378980mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30379654..30379781mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30379897..30379972mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30381573..30381938mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30383763..30383843mRNAPaHa07g14280.1
CDS
part_ofPaHa07g14280.1-CDS-7-1787993825:30383953..30383989mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30367968..30368078mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30372885..30373011mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30374295..30374746mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30375852..30375947mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30376045..30376114mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30378872..30378980mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30379654..30379781mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30379897..30379972mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30381573..30381938mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30383763..30383843mRNAPaHa07g14280.1
exon
part_ofPaHa07g14280.1-exon-7-1787993825:30383953..30383989mRNAPaHa07g14280.1
