Feature identity
- Identifier
- Pa05g3107.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 996 bp
- Genomic location
- Pa05:71,327,052–71,334,695
- Strand
- +
West Indian T2T · mRNA
Pa05g3107.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 996
- bp
- Pa05:71,327,052–71,334,695
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g3107
- eggNOG
- Preferred name: NFYA2 | Seed ortholog: 337451.A0A3S4NVD2 | COG: S | eggNOG OG: CBFB_NFYA@2759|A-1, CBFB_NFYA@33090|u-9, CBFB_NFYA@3398|BF-12
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009567 double fertilization forming a zygote and endosperm; GO:0016602 CCAAT-binding factor complex; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K08064 | Pathway: 04612, 05017, 05152 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g3107.2-protein
derives_frommRNAPa05g3107.2
mRNAPa05g3107.2
part_ofgenePa05g3107
exon
part_ofPa05g3107.2:1mRNAPa05g3107.2
exon
part_ofPa05g3107.2:2mRNAPa05g3107.2
exon
part_ofPa05g3107.2:3mRNAPa05g3107.2
exon
part_ofPa05g3107.2:4mRNAPa05g3107.2
exon
part_ofPa05g3107.2:5mRNAPa05g3107.2
CDS
part_ofPa05g3107.2:cdsmRNAPa05g3107.2
