Feature identity
- Identifier
- Pa05g3319.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 891 bp
- Genomic location
- Pa05:74,156,099–74,163,373
- Strand
- +
West Indian T2T · mRNA
Pa05g3319.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 891
- bp
- Pa05:74,156,099–74,163,373
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g3319
- eggNOG
- Preferred name: LOC104599664 | Seed ortholog: 337451.A0A3S3ME53 | COG: COG1028 | eggNOG OG: adh_short_C2@131567|AWH-19, adh_short_C2@3398|AxtH-49
- Gene Ontology
- GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0005782 peroxisomal matrix; GO:0005829 cytosol; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0008150 biological_process; GO:0008670 2,4-dienoyl-CoA reductase (NADPH) activity; GO:0009062 fatty acid catabolic process; GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity; GO:0030437 ascospore formation; GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase
- KEGG
- EC: ec:1.3.1.124 | KO: K13237 | Pathway: 04146 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g3319.1-protein
derives_frommRNAPa05g3319.1
mRNAPa05g3319.1
part_ofgenePa05g3319
exon
part_ofPa05g3319.1:1mRNAPa05g3319.1
exon
part_ofPa05g3319.1:2mRNAPa05g3319.1
exon
part_ofPa05g3319.1:3mRNAPa05g3319.1
exon
part_ofPa05g3319.1:4mRNAPa05g3319.1
exon
part_ofPa05g3319.1:5mRNAPa05g3319.1
CDS
part_ofPa05g3319.1:cdsmRNAPa05g3319.1
