Feature identity
- Identifier
- PaHa01g02220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 867 bp
- Genomic location
- 1:2,543,276–2,548,065
- Strand
- +
Hass · mRNA
PaHa01g02220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 867
- bp
- 1:2,543,276–2,548,065
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g02220
- eggNOG
- Preferred name: WOX8 | Seed ortholog: 337451.A0A3S3NZX2 | COG: S | eggNOG OG: Homeodomain@131567|RH-16, Homeodomain@2759|XV-17!, Homeodomain@33090|BEo-23, Homeodomain@3398|Itz-33
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010072 primary shoot apical meristem specification; GO:0010087 phloem or xylem histogenesis; GO:0051301 cell division
- KEGG
- KO: K09299, K09357, K09378, K09379, K09380, K23560 | Pathway: 04550, 05202, 05206, 05215 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g02220.1-protein
derives_frommRNAPaHa01g02220.1
mRNAPaHa01g02220.1
part_ofgenePaHa01g02220
CDS
part_ofPaHa01g02220.1-CDS-1-1787993825:2543276..2543522mRNAPaHa01g02220.1
CDS
part_ofPaHa01g02220.1-CDS-1-1787993825:2546802..2547332mRNAPaHa01g02220.1
CDS
part_ofPaHa01g02220.1-CDS-1-1787993825:2547977..2548065mRNAPaHa01g02220.1
exon
part_ofPaHa01g02220.1-exon-1-1787993825:2543276..2543522mRNAPaHa01g02220.1
exon
part_ofPaHa01g02220.1-exon-1-1787993825:2546802..2547332mRNAPaHa01g02220.1
exon
part_ofPaHa01g02220.1-exon-1-1787993825:2547977..2548065mRNAPaHa01g02220.1
