Feature identity
- Identifier
- Pa05g3776.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 867 bp
- Genomic location
- Pa05:79,490,725–79,491,866
- Strand
- +
West Indian T2T · mRNA
Pa05g3776.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 867
- bp
- Pa05:79,490,725–79,491,866
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g3776
- eggNOG
- Preferred name: DOF3.6 | Seed ortholog: 337451.A0A3S3QA94 | COG: S | eggNOG OG: zf-Dof@131567|A-1*, zf-Dof@1437183|AEN-21, zf-Dof@3193|Bv-8, zf-Dof@33090|d-5, zf-Dof@3398|GM-11, zf-Dof@58023|Ea-10
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003002 regionalization; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009611 response to wounding; GO:0009625 response to insect; GO:0009640 photomorphogenesis; GO:0009753 response to jasmonic acid; GO:0010439 regulation of glucosinolate biosynthetic process; GO:0045893 positive regulation of DNA-templated transcription; GO:0090057 root radial pattern formation; GO:2000280 regulation of root development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g3776.2-protein
derives_frommRNAPa05g3776.2
exon
part_ofPa05g3776.1:1mRNAPa05g3776.2
mRNAPa05g3776.2
part_ofgenePa05g3776
exon
part_ofPa05g3776.2:3mRNAPa05g3776.2
exon
part_ofPa05g3776.2:4mRNAPa05g3776.2
CDS
part_ofPa05g3776.2:cdsmRNAPa05g3776.2
