Feature identity
- Identifier
- Pa05g3581.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,395 bp
- Genomic location
- Pa05:77,149,870–77,151,264
- Strand
- +
West Indian T2T · mRNA
Pa05g3581.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,395
- bp
- Pa05:77,149,870–77,151,264
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa05g3581
- eggNOG
- Preferred name: TCP2 | Seed ortholog: 337451.A0A3S3Q9D2 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|AO-8, TCP@58023|f-6
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009637 response to blue light; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048366 leaf development; GO:2000306 positive regulation of photomorphogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa05g3581.1-protein
derives_frommRNAPa05g3581.1
mRNAPa05g3581.1
part_ofgenePa05g3581
exon
part_ofPa05g3581.1:1mRNAPa05g3581.1
CDS
part_ofPa05g3581.1:cdsmRNAPa05g3581.1
