Feature identity
- Identifier
- PaHa07g12500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 693 bp
- Genomic location
- 7:24,000,201–24,010,536
- Strand
- −
Hass · mRNA
PaHa07g12500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 693
- bp
- 7:24,000,201–24,010,536
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g12500
- eggNOG
- Preferred name: LOC110778021 | Seed ortholog: 337451.A0A3S3NK97 | COG: S | eggNOG OG: HTH_3@131567|bK-22, HTH_3@35493|NMa-37, MBF1@2759|A-1, MBF1@35493|BL-12
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003713 transcription coactivator activity; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009873 ethylene-activated signaling pathway; GO:0045893 positive regulation of DNA-templated transcription; GO:0071456 cellular response to hypoxia
- KEGG
- KO: K03627 | Pathway: 03010 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g12500.1-protein
derives_frommRNAPaHa07g12500.1
mRNAPaHa07g12500.1
part_ofgenePaHa07g12500
CDS
part_ofPaHa07g12500.1-CDS-7-1787993825:24000201..24000399mRNAPaHa07g12500.1
CDS
part_ofPaHa07g12500.1-CDS-7-1787993825:24003433..24003494mRNAPaHa07g12500.1
CDS
part_ofPaHa07g12500.1-CDS-7-1787993825:24010023..24010224mRNAPaHa07g12500.1
CDS
part_ofPaHa07g12500.1-CDS-7-1787993825:24010307..24010536mRNAPaHa07g12500.1
exon
part_ofPaHa07g12500.1-exon-7-1787993825:24000201..24000399mRNAPaHa07g12500.1
exon
part_ofPaHa07g12500.1-exon-7-1787993825:24003433..24003494mRNAPaHa07g12500.1
exon
part_ofPaHa07g12500.1-exon-7-1787993825:24010023..24010224mRNAPaHa07g12500.1
exon
part_ofPaHa07g12500.1-exon-7-1787993825:24010307..24010536mRNAPaHa07g12500.1
