Feature identity
- Identifier
- Pa06g0344.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 3,102 bp
- Genomic location
- Pa06:4,383,781–4,392,545
- Strand
- −
West Indian T2T · mRNA
Pa06g0344.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,102
- bp
- Pa06:4,383,781–4,392,545
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa06g0344
- eggNOG
- Preferred name: NLP7 | Seed ortholog: 337451.A0A443PFK5 | COG: S | eggNOG OG: PB1@131567|A-1*, PB1@2759|Al-8!, PB1@3193|km-21, PB1@3398|sR-22, RWP-RK@131567|Fy-13, RWP-RK@33090|YN-24, RWP-RK@3398|el-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0001046 core promoter sequence-specific DNA binding; GO:0001216 DNA-binding transcription activator activity; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0010118 stomatal movement; GO:0010167 response to nitrate; GO:0042128 nitrate assimilation
- KEGG
- KO: K13422 | Pathway: 04016, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa06g0344.1-protein
derives_frommRNAPa06g0344.1
mRNAPa06g0344.1
part_ofgenePa06g0344
exon
part_ofPa06g0344.1:1mRNAPa06g0344.1
exon
part_ofPa06g0344.1:2mRNAPa06g0344.1
exon
part_ofPa06g0344.1:3mRNAPa06g0344.1
exon
part_ofPa06g0344.1:4mRNAPa06g0344.1
exon
part_ofPa06g0344.1:5mRNAPa06g0344.1
CDS
part_ofPa06g0344.1:cdsmRNAPa06g0344.1
