Feature identity
- Identifier
- Pa06g1494.4
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 504 bp
- Genomic location
- Pa06:23,042,880–23,043,899
- Strand
- −
West Indian T2T · mRNA
Pa06g1494.4
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 504
- bp
- Pa06:23,042,880–23,043,899
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa06g1494
- eggNOG
- Preferred name: LOC104590505 | Seed ortholog: 337451.A0A3S3NXT1 | COG: S | eggNOG OG: Homeodomain@131567|HP-13, Homeodomain@35493|CNy-26, MEKHLA@131567|A-1, MEKHLA@35493|P-5, START@131567|e-5, START@2759|CL-9, START@3398|Mr-14, START@35493|JK-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009855 determination of bilateral symmetry; GO:0009880 embryonic pattern specification; GO:0009943 adaxial/abaxial axis specification; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009955 adaxial/abaxial pattern specification; GO:0010014 meristem initiation; GO:0010072 primary shoot apical meristem specification; GO:0080060 integument development
- KEGG
- KO: K09338 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa06g1494.4-protein
derives_frommRNAPa06g1494.4
exon
part_ofPa06g1494.2:21mRNAPa06g1494.4
mRNAPa06g1494.4
part_ofgenePa06g1494
exon
part_ofPa06g1494.4:23mRNAPa06g1494.4
exon
part_ofPa06g1494.4:24mRNAPa06g1494.4
CDS
part_ofPa06g1494.4:cdsmRNAPa06g1494.4
