Feature identity
- Identifier
- Pa06g1458.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,718 bp
- Genomic location
- Pa06:22,059,588–22,080,168
- Strand
- −
West Indian T2T · mRNA
Pa06g1458.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,718
- bp
- Pa06:22,059,588–22,080,168
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa06g1458
- eggNOG
- Preferred name: ARF6 | Seed ortholog: 337451.A0A443PDD7 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aeu-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Dy-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BZk-26!
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009908 flower development
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa06g1458.2-protein
derives_frommRNAPa06g1458.2
mRNAPa06g1458.2
part_ofgenePa06g1458
exon
part_ofPa06g1458.2:1mRNAPa06g1458.2
exon
part_ofPa06g1458.2:10mRNAPa06g1458.2
exon
part_ofPa06g1458.2:11mRNAPa06g1458.2
exon
part_ofPa06g1458.2:12mRNAPa06g1458.2
exon
part_ofPa06g1458.2:13mRNAPa06g1458.2
exon
part_ofPa06g1458.2:14mRNAPa06g1458.2
exon
part_ofPa06g1458.2:2mRNAPa06g1458.2
exon
part_ofPa06g1458.2:3mRNAPa06g1458.2
exon
part_ofPa06g1458.2:4mRNAPa06g1458.2
exon
part_ofPa06g1458.2:5mRNAPa06g1458.2
exon
part_ofPa06g1458.2:6mRNAPa06g1458.2
exon
part_ofPa06g1458.2:7mRNAPa06g1458.2
exon
part_ofPa06g1458.2:8mRNAPa06g1458.2
exon
part_ofPa06g1458.2:9mRNAPa06g1458.2
CDS
part_ofPa06g1458.2:cdsmRNAPa06g1458.2
