Feature identity
- Identifier
- Pa06g1801.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 753 bp
- Genomic location
- Pa06:37,003,726–37,004,478
- Strand
- +
West Indian T2T · mRNA
Pa06g1801.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 753
- bp
- Pa06:37,003,726–37,004,478
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa06g1801
- eggNOG
- Preferred name: LOC120112752 | Seed ortholog: 337451.A0A443PCX8 | COG: S | eggNOG OG: Histone@131567|B-2, Histone@33090|DV-12, Histone@3398|Ia-15
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0016602 CCAAT-binding factor complex; GO:0045893 positive regulation of DNA-templated transcription; GO:0048579 negative regulation of long-day photoperiodism, flowering
- KEGG
- EC: ec:2.7.7.7 | KO: K08066 | Pathway: 03030, 03410, 03420, 04612, 05152 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa06g1801.1-protein
derives_frommRNAPa06g1801.1
mRNAPa06g1801.1
part_ofgenePa06g1801
exon
part_ofPa06g1801.1:1mRNAPa06g1801.1
CDS
part_ofPa06g1801.1:cdsmRNAPa06g1801.1
