Pa06g2095.1

West Indian T2T · mRNA

Pa06g2095.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,934
bp
Pa06:48,705,989–48,734,713
genomic location
Record overview

Feature identity

Identifier
Pa06g2095.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
2,934 bp
Genomic location
Pa06:48,705,989–48,734,713
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa06g2095

eggNOG
Preferred name: RFC1 | Seed ortholog: 337451.A0A3S4PC42 | COG: COG2256 | eggNOG OG: AAA@131567|J-4, BRCT@131567|A-1, RFC1@131567|A-1
Gene Ontology
GO:0000712 resolution of meiotic recombination intermediates; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003689 DNA clamp loader activity; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0006974 DNA damage response; GO:0008047 enzyme activator activity; GO:0016887 ATP hydrolysis activity; GO:0019904 protein domain specific binding; GO:0040029 epigenetic regulation of gene expression; GO:0043565 sequence-specific DNA binding; GO:0051321 meiotic cell cycle; GO:0061860 DNA clamp unloader activity; GO:0140297 DNA-binding transcription factor binding
KEGG
KO: K10754 | Pathway: 03030, 03410, 03420, 03430 | BRITE: 00001, 03032, 03400
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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