Feature identity
- Identifier
- PaHa07g09490.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 318 bp
- Genomic location
- 7:17,458,493–17,459,749
- Strand
- −
Hass · mRNA
PaHa07g09490.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 318
- bp
- 7:17,458,493–17,459,749
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g09490
- eggNOG
- Preferred name: LOC103719483 | Seed ortholog: 337451.A0A3S3MRD1 | eggNOG OG: Myb_DNA-binding@131567|Se-18, Myb_DNA-binding@35493|Ajp-29
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0006355 regulation of DNA-templated transcription; GO:0010026 trichome differentiation; GO:0010063 positive regulation of trichoblast fate specification; GO:0010091 trichome branching; GO:0010154 fruit development; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0010376 stomatal complex formation; GO:0030154 cell differentiation; GO:0045892 negative regulation of DNA-templated transcription; GO:0048629 trichome patterning; GO:0048765 root hair cell differentiation; GO:0080147 root hair cell development; GO:0090627 plant epidermal cell differentiation; GO:1900032 regulation of trichome patterning; GO:1900033 negative regulation of trichome patterning; GO:2000039 regulation of trichome morphogenesis
- KEGG
- KO: K09422 | Pathway: 03040, 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g09490.1-protein
derives_frommRNAPaHa07g09490.1
mRNAPaHa07g09490.1
part_ofgenePaHa07g09490
CDS
part_ofPaHa07g09490.1-CDS-7-1787993825:17458493..17458646mRNAPaHa07g09490.1
CDS
part_ofPaHa07g09490.1-CDS-7-1787993825:17459366..17459483mRNAPaHa07g09490.1
CDS
part_ofPaHa07g09490.1-CDS-7-1787993825:17459704..17459749mRNAPaHa07g09490.1
exon
part_ofPaHa07g09490.1-exon-7-1787993825:17458493..17458646mRNAPaHa07g09490.1
exon
part_ofPaHa07g09490.1-exon-7-1787993825:17459366..17459483mRNAPaHa07g09490.1
exon
part_ofPaHa07g09490.1-exon-7-1787993825:17459704..17459749mRNAPaHa07g09490.1
