Feature identity
- Identifier
- PaHa07g09280.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 606 bp
- Genomic location
- 7:17,057,704–17,067,236
- Strand
- +
Hass · mRNA
PaHa07g09280.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 606
- bp
- 7:17,057,704–17,067,236
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g09280
- eggNOG
- Preferred name: AGL12 | Seed ortholog: 337451.A0A3S3MY59 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@1437183|Bb-8, K-box@2759|v-6, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|so-21, SRF-TF@3398|APQ-23, SRF-TF@35493|bP-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0048364 root development
- KEGG
- KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g09280.1-protein
derives_frommRNAPaHa07g09280.1
mRNAPaHa07g09280.1
part_ofgenePaHa07g09280
CDS
part_ofPaHa07g09280.1-CDS-7-1787993825:17057704..17057888mRNAPaHa07g09280.1
CDS
part_ofPaHa07g09280.1-CDS-7-1787993825:17058028..17058109mRNAPaHa07g09280.1
CDS
part_ofPaHa07g09280.1-CDS-7-1787993825:17059957..17060018mRNAPaHa07g09280.1
CDS
part_ofPaHa07g09280.1-CDS-7-1787993825:17065605..17065704mRNAPaHa07g09280.1
CDS
part_ofPaHa07g09280.1-CDS-7-1787993825:17065805..17065846mRNAPaHa07g09280.1
CDS
part_ofPaHa07g09280.1-CDS-7-1787993825:17066981..17067022mRNAPaHa07g09280.1
CDS
part_ofPaHa07g09280.1-CDS-7-1787993825:17067144..17067236mRNAPaHa07g09280.1
exon
part_ofPaHa07g09280.1-exon-7-1787993825:17057704..17057888mRNAPaHa07g09280.1
exon
part_ofPaHa07g09280.1-exon-7-1787993825:17058028..17058109mRNAPaHa07g09280.1
exon
part_ofPaHa07g09280.1-exon-7-1787993825:17059957..17060018mRNAPaHa07g09280.1
exon
part_ofPaHa07g09280.1-exon-7-1787993825:17065605..17065704mRNAPaHa07g09280.1
exon
part_ofPaHa07g09280.1-exon-7-1787993825:17065805..17065846mRNAPaHa07g09280.1
exon
part_ofPaHa07g09280.1-exon-7-1787993825:17066981..17067022mRNAPaHa07g09280.1
exon
part_ofPaHa07g09280.1-exon-7-1787993825:17067144..17067236mRNAPaHa07g09280.1
