Feature identity
- Identifier
- PaHa01g21620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 810 bp
- Genomic location
- 1:43,226,867–43,250,256
- Strand
- +
Hass · mRNA
PaHa01g21620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 810
- bp
- 1:43,226,867–43,250,256
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g21620
- eggNOG
- Preferred name: LOC102596619 | Seed ortholog: 4432.A0A1U7ZMN0 | COG: COG0545 | eggNOG OG: FKBP_C@131567|JD-12
- Gene Ontology
- GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0009535 chloroplast thylakoid membrane; GO:0009543 chloroplast thylakoid lumen; GO:0009579 thylakoid; GO:0016491 oxidoreductase activity; GO:0031977 thylakoid lumen
- KEGG
- EC: ec:5.2.1.8 | KO: K01802 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g21620.1-protein
derives_frommRNAPaHa01g21620.1
mRNAPaHa01g21620.1
part_ofgenePaHa01g21620
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43226867..43226953mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43227146..43227239mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43238255..43238392mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43240399..43240484mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43240575..43240625mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43240731..43240811mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43243337..43243381mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43243779..43243834mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43250005..43250080mRNAPaHa01g21620.1
CDS
part_ofPaHa01g21620.1-CDS-1-1787993825:43250161..43250256mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43226867..43226953mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43227146..43227239mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43238255..43238392mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43240399..43240484mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43240575..43240625mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43240731..43240811mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43243337..43243381mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43243779..43243834mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43250005..43250080mRNAPaHa01g21620.1
exon
part_ofPaHa01g21620.1-exon-1-1787993825:43250161..43250256mRNAPaHa01g21620.1
