Feature identity
- Identifier
- PaHa07g05400.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,749 bp
- Genomic location
- 7:9,742,146–9,755,576
- Strand
- −
Hass · mRNA
PaHa07g05400.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,749
- bp
- 7:9,742,146–9,755,576
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g05400
- eggNOG
- Preferred name: NDB2 | Seed ortholog: 337451.A0A3S3QFS2 | COG: COG1252 | eggNOG OG: Pyr_redox_2@131567|TB-17!, Pyr_redox_2@2759|CoT-27
- Gene Ontology
- GO:0003954 NADH dehydrogenase activity; GO:0003959 NADPH dehydrogenase activity; GO:0005739 mitochondrion; GO:0005758 mitochondrial intermembrane space; GO:0005777 peroxisome; GO:0009507 chloroplast; GO:0009916 alternative oxidase activity; GO:0016491 oxidoreductase activity; GO:0031314 extrinsic component of mitochondrial inner membrane; GO:0099617 matrix side of mitochondrial inner membrane
- KEGG
- EC: ec:1.6.5.9 | KO: K03885 | Pathway: 00190, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g05400.1-protein
derives_frommRNAPaHa07g05400.1
mRNAPaHa07g05400.1
part_ofgenePaHa07g05400
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9742146..9742233mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9742751..9742870mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9744785..9744906mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9745820..9746092mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9748051..9748155mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9748447..9748663mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9749869..9750119mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9750506..9750712mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9752388..9752664mRNAPaHa07g05400.1
CDS
part_ofPaHa07g05400.1-CDS-7-1787993825:9755488..9755576mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9742146..9742233mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9742751..9742870mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9744785..9744906mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9745820..9746092mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9748051..9748155mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9748447..9748663mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9749869..9750119mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9750506..9750712mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9752388..9752664mRNAPaHa07g05400.1
exon
part_ofPaHa07g05400.1-exon-7-1787993825:9755488..9755576mRNAPaHa07g05400.1
