Feature identity
- Identifier
- Pa07g2478.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 396 bp
- Genomic location
- Pa07:58,107,897–58,131,801
- Strand
- +
West Indian T2T · mRNA
Pa07g2478.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 396
- bp
- Pa07:58,107,897–58,131,801
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa07g2478
- eggNOG
- Preferred name: ABCC1 | Seed ortholog: 337451.A0A3S3MZB9 | COG: S | eggNOG OG: ABC_membrane_2@131567|A-1, ABC_membrane_2@2759|G-3!, ABC_tran|TL31Y9@131567
- Gene Ontology
- GO:0005515 protein binding; GO:0005777 peroxisome; GO:0005778 peroxisomal membrane; GO:0006635 fatty acid beta-oxidation; GO:0006744 ubiquinone biosynthetic process; GO:0010030 positive regulation of seed germination; GO:0015916 fatty-acyl-CoA transport; GO:0016042 lipid catabolic process; GO:0042626 ATPase-coupled transmembrane transporter activity; GO:0046861 glyoxysomal membrane
- KEGG
- EC: ec:7.6.2.4 | KO: K25819 | Pathway: 02010, 04146 | BRITE: 00001, 01000, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa07g2478.1-protein
derives_frommRNAPa07g2478.1
mRNAPa07g2478.1
part_ofgenePa07g2478
exon
part_ofPa07g2478.1:1mRNAPa07g2478.1
exon
part_ofPa07g2478.1:2mRNAPa07g2478.1
exon
part_ofPa07g2478.1:3mRNAPa07g2478.1
exon
part_ofPa07g2478.1:4mRNAPa07g2478.1
exon
part_ofPa07g2478.1:5mRNAPa07g2478.1
CDS
part_ofPa07g2478.1:cdsmRNAPa07g2478.1
