Feature identity
- Identifier
- Pa08g0098.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,248 bp
- Genomic location
- Pa08:1,388,537–1,395,608
- Strand
- −
West Indian T2T · mRNA
Pa08g0098.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,248
- bp
- Pa08:1,388,537–1,395,608
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g0098
- eggNOG
- Preferred name: BZIP68 | Seed ortholog: 337451.A0A443P981 | COG: S | eggNOG OG: MFMR@131221|G-3, MFMR@131567|A-1*, MFMR@3398|Y-5, MFMR_assoc@131567|A-1*, MFMR_assoc@3398|M-4, bZIP_1@131567|Ac-7, bZIP_1@3398|wD-22
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K09060 | Pathway: 04011 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g0098.2-protein
derives_frommRNAPa08g0098.2
exon
part_ofPa08g0098.1:10mRNAPa08g0098.2
exon
part_ofPa08g0098.1:11mRNAPa08g0098.2
exon
part_ofPa08g0098.1:12mRNAPa08g0098.2
exon
part_ofPa08g0098.1:13mRNAPa08g0098.2
exon
part_ofPa08g0098.1:14mRNAPa08g0098.2
exon
part_ofPa08g0098.1:15mRNAPa08g0098.2
exon
part_ofPa08g0098.1:16mRNAPa08g0098.2
exon
part_ofPa08g0098.1:6mRNAPa08g0098.2
exon
part_ofPa08g0098.1:7mRNAPa08g0098.2
exon
part_ofPa08g0098.1:8mRNAPa08g0098.2
exon
part_ofPa08g0098.1:9mRNAPa08g0098.2
mRNAPa08g0098.2
part_ofgenePa08g0098
exon
part_ofPa08g0098.2:17mRNAPa08g0098.2
CDS
part_ofPa08g0098.2:cdsmRNAPa08g0098.2
