Feature identity
- Identifier
- PaHa07g01490.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 723 bp
- Genomic location
- 7:1,866,547–1,879,710
- Strand
- −
Hass · mRNA
PaHa07g01490.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 723
- bp
- 7:1,866,547–1,879,710
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g01490
- eggNOG
- Preferred name: SVP | Seed ortholog: 4432.A0A1U8B8Q9 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|F-3, K-box@3398|ZT-16, K-box@35493|M-4, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BZM-27
- Gene Ontology
- GO:0000900 mRNA regulatory element binding translation repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009266 response to temperature stimulus; GO:0009910 negative regulation of flower development; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription
- KEGG
- KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g01490.1-protein
derives_frommRNAPaHa07g01490.1
mRNAPaHa07g01490.1
part_ofgenePaHa07g01490
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1866547..1866589mRNAPaHa07g01490.1
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1873421..1873575mRNAPaHa07g01490.1
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1873674..1873733mRNAPaHa07g01490.1
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1876111..1876152mRNAPaHa07g01490.1
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1876222..1876321mRNAPaHa07g01490.1
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1876430..1876491mRNAPaHa07g01490.1
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1876896..1876974mRNAPaHa07g01490.1
CDS
part_ofPaHa07g01490.1-CDS-7-1787993825:1879529..1879710mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1866547..1866589mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1873421..1873575mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1873674..1873733mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1876111..1876152mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1876222..1876321mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1876430..1876491mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1876896..1876974mRNAPaHa07g01490.1
exon
part_ofPaHa07g01490.1-exon-7-1787993825:1879529..1879710mRNAPaHa07g01490.1
