PaHa07g00900.1

Hass · mRNA

PaHa07g00900.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,243
bp
7:1,208,498–1,231,441
genomic location
Record overview

Feature identity

Identifier
PaHa07g00900.1
Feature type
mRNA
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
3,243 bp
Genomic location
7:1,208,498–1,231,441
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: PaHa07g00900

eggNOG
Preferred name: LOC104605988 | Seed ortholog: 337451.A0A3S3NAU9 | COG: S | eggNOG OG: Ank_2@131567|Mm-10, Ank_2@1437183|kAg-32, Ank_2@2759|BXW-16, Ank_2@3193|Xgc-28, IQ@131567|aD-16, IQ@3398|COo-26, IQ@35493|Alf-22, TIG@131567|Og-15, TIG@33090|Bjr-29, TIG@3398|BzM-31
Gene Ontology
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0010150 leaf senescence; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding; GO:0050832 defense response to fungus; GO:0070417 cellular response to cold; GO:0106167 extracellular ATP signaling; GO:1900367 positive regulation of defense response to insect
KEGG
KO: K21596 | Pathway: 01523, 03266, 03440, 04010, 04014, 04024, 04062, 04064, 04066, 04071, 04075, 04144, 04151, 04210, 04211, 04218, 04380, 04613, 04620, 04621, 04622, 04623, 04624, 04625, 04657, 04658, 04659, 04660, 04662, 04668, 04722, 04820, 04917, 04920, 04926, 04931, 04932, 04933, 04936, 05010, 05022, 05030, 05132, 05133, 05134, 05135, 05140, 05142, 05145, 05146, 05152, 05160, 05161, 05162, 05163, 05164, 05165, 05166, 05167, 05168, 05169, 05170, 05171, 05200, 05202, 05203, 05206, 05207, 05208, 05212, 05215, 05220, 05221, 05222, 05224, 05235, 05321, 05415, 05417, 05418 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

CDSPaHa07g00900.1-CDS-7-1787993825:1208498..1208608
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1210099..1210422
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1211255..1211834
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1212463..1213160
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1213295..1213867
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1216942..1217000
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1217097..1217276
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1217374..1217508
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1217668..1217842
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1219630..1219672
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1220594..1220682
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1222350..1222465
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1224750..1224869
part_of
CDSPaHa07g00900.1-CDS-7-1787993825:1231402..1231441
part_of
exonPaHa07g00900.1-exon-7-1787993825:1208498..1208608
part_of
exonPaHa07g00900.1-exon-7-1787993825:1210099..1210422
part_of
exonPaHa07g00900.1-exon-7-1787993825:1211255..1211834
part_of
exonPaHa07g00900.1-exon-7-1787993825:1212463..1213160
part_of
exonPaHa07g00900.1-exon-7-1787993825:1213295..1213867
part_of
exonPaHa07g00900.1-exon-7-1787993825:1216942..1217000
part_of
exonPaHa07g00900.1-exon-7-1787993825:1217097..1217276
part_of
exonPaHa07g00900.1-exon-7-1787993825:1217374..1217508
part_of
exonPaHa07g00900.1-exon-7-1787993825:1217668..1217842
part_of
exonPaHa07g00900.1-exon-7-1787993825:1219630..1219672
part_of
exonPaHa07g00900.1-exon-7-1787993825:1220594..1220682
part_of
exonPaHa07g00900.1-exon-7-1787993825:1222350..1222465
part_of
exonPaHa07g00900.1-exon-7-1787993825:1224750..1224869
part_of
exonPaHa07g00900.1-exon-7-1787993825:1231402..1231441
part_of
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