Feature identity
- Identifier
- Pa08g2053.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 750 bp
- Genomic location
- Pa08:50,630,803–50,636,353
- Strand
- −
West Indian T2T · mRNA
Pa08g2053.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 750
- bp
- Pa08:50,630,803–50,636,353
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa08g2053
- eggNOG
- Preferred name: BI-1 | Seed ortholog: 337451.A0A443P7M6 | COG: S | eggNOG OG: Bax1-I@131567|B-2, Bax1-I@2759|I-4
- Gene Ontology
- GO:0000038 very long-chain fatty acid metabolic process; GO:0005515 protein binding; GO:0005635 nuclear envelope; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0006983 ER overload response; GO:0009414 response to water deprivation; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0043069 negative regulation of programmed cell death; GO:0140506 endoplasmic reticulum-autophagosome adaptor activity
- KEGG
- KO: K21889 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa08g2053.1-protein
derives_frommRNAPa08g2053.1
mRNAPa08g2053.1
part_ofgenePa08g2053
exon
part_ofPa08g2053.1:1mRNAPa08g2053.1
exon
part_ofPa08g2053.1:2mRNAPa08g2053.1
exon
part_ofPa08g2053.1:3mRNAPa08g2053.1
exon
part_ofPa08g2053.1:4mRNAPa08g2053.1
exon
part_ofPa08g2053.1:5mRNAPa08g2053.1
exon
part_ofPa08g2053.1:6mRNAPa08g2053.1
CDS
part_ofPa08g2053.1:cdsmRNAPa08g2053.1
