Feature identity
- Identifier
- Pa09g0330.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,179 bp
- Genomic location
- Pa09:3,882,071–3,896,902
- Strand
- +
West Indian T2T · mRNA
Pa09g0330.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,179
- bp
- Pa09:3,882,071–3,896,902
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa09g0330
- eggNOG
- Preferred name: ERF071 | Seed ortholog: 337451.A0A3S3NUE5 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|KI-15, AP2@33090|Hp-14, AP2@3398|jd-20, AP2@58023|Vz-18
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0034059 response to anoxia; GO:0045893 positive regulation of DNA-templated transcription; GO:0071456 cellular response to hypoxia; GO:1990837 sequence-specific double-stranded DNA binding; GO:2000280 regulation of root development
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa09g0330.2-protein
derives_frommRNAPa09g0330.2
exon
part_ofPa09g0330.1:1mRNAPa09g0330.2
mRNAPa09g0330.2
part_ofgenePa09g0330
exon
part_ofPa09g0330.2:3mRNAPa09g0330.2
exon
part_ofPa09g0330.2:4mRNAPa09g0330.2
exon
part_ofPa09g0330.2:5mRNAPa09g0330.2
CDS
part_ofPa09g0330.2:cdsmRNAPa09g0330.2
