Feature identity
- Identifier
- Pa09g0882.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,278 bp
- Genomic location
- Pa09:20,453,333–20,475,615
- Strand
- −
West Indian T2T · mRNA
Pa09g0882.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,278
- bp
- Pa09:20,453,333–20,475,615
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa09g0882
- eggNOG
- Preferred name: BIM1 | Seed ortholog: 337451.A0A3S3R5X5 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@1437183|CYB-25, HLH@33090|AAF-17, HLH@3398|BVK-22, HLH@35493|AMq-18
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042802 identical protein binding; GO:1902448 positive regulation of shade avoidance
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa09g0882.1-protein
derives_frommRNAPa09g0882.1
mRNAPa09g0882.1
part_ofgenePa09g0882
exon
part_ofPa09g0882.1:1mRNAPa09g0882.1
exon
part_ofPa09g0882.1:2mRNAPa09g0882.1
exon
part_ofPa09g0882.1:3mRNAPa09g0882.1
exon
part_ofPa09g0882.1:4mRNAPa09g0882.1
exon
part_ofPa09g0882.1:5mRNAPa09g0882.1
exon
part_ofPa09g0882.1:6mRNAPa09g0882.1
exon
part_ofPa09g0882.1:7mRNAPa09g0882.1
exon
part_ofPa09g0882.1:8mRNAPa09g0882.1
CDS
part_ofPa09g0882.1:cdsmRNAPa09g0882.1
