West Indian T2T · mRNA

Pa10g1024.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,163
bp
Pa10:30,519,358–30,536,539
genomic location
Record overview

Feature identity

Identifier
Pa10g1024.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
2,163 bp
Genomic location
Pa10:30,519,358–30,536,539
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: TIF3B1 | Seed ortholog: 337451.A0A3S3R0Q9 | COG: COG0823 | eggNOG OG: RRM_1@131567|Gk-13, RRM_1@2759|hZ-20, eIF2A@131567|C-2
Gene Ontology
GO:0001732 formation of cytoplasmic translation initiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003313 heart rudiment development; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006396 RNA processing; GO:0006413 translational initiation; GO:0006446 regulation of translational initiation; GO:0008150 biological_process; GO:0009536 plastid; GO:0009847 spore germination; GO:0010608 post-transcriptional regulation of gene expression; GO:0014032 neural crest cell development; GO:0030707 follicle cell of egg chamber development; GO:0071466 cellular response to xenobiotic stimulus; GO:0075522 IRES-dependent viral translational initiation; GO:0075525 viral translational termination-reinitiation
KEGG
KO: K03253 | BRITE: 00001, 03012, 03019
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.