Feature identity
- Identifier
- PaHa06g20950.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,875 bp
- Genomic location
- 6:54,853,977–54,859,266
- Strand
- +
Hass · mRNA
PaHa06g20950.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,875
- bp
- 6:54,853,977–54,859,266
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g20950
- eggNOG
- Preferred name: LOC104585604 | Seed ortholog: 337451.A0A443P2I9 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@1437183|FuB-29, Cu-oxidase@2759|v-6, Cu-oxidase@3193|Abn-19, Cu-oxidase@3398|CqB-24, Cu-oxidase@35493|Kt-12, Cu-oxidase_2@131567|z-6, Cu-oxidase_2@1437183|EtR-29, Cu-oxidase_2@2759|HU-12, Cu-oxidase_2@3193|kL-18, Cu-oxidase_2@3398|BEo-23, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@2759|Av-9, Cu-oxidase_3@3193|ALC-21
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008447 L-ascorbate oxidase activity; GO:0009897 external side of plasma membrane; GO:0009986 cell surface; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0040003 chitin-based cuticle development; GO:0045178 basal part of cell; GO:0055070 copper ion homeostasis; GO:0098711 iron ion import across plasma membrane
- KEGG
- EC: ec:1.10.3.2 | KO: K05909 | Pathway: 00053, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g20950.1-protein
derives_frommRNAPaHa06g20950.1
mRNAPaHa06g20950.1
part_ofgenePaHa06g20950
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54853977..54854151mRNAPaHa06g20950.1
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54855187..54855281mRNAPaHa06g20950.1
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54856592..54856743mRNAPaHa06g20950.1
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54857147..54857391mRNAPaHa06g20950.1
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54857507..54857632mRNAPaHa06g20950.1
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54857750..54858338mRNAPaHa06g20950.1
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54858434..54858786mRNAPaHa06g20950.1
CDS
part_ofPaHa06g20950.1-CDS-6-1787993825:54859127..54859266mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54853977..54854151mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54855187..54855281mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54856592..54856743mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54857147..54857391mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54857507..54857632mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54857750..54858338mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54858434..54858786mRNAPaHa06g20950.1
exon
part_ofPaHa06g20950.1-exon-6-1787993825:54859127..54859266mRNAPaHa06g20950.1
