Feature identity
- Identifier
- Pa11g0052.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 684 bp
- Genomic location
- Pa11:1,499,024–1,499,707
- Strand
- +
West Indian T2T · mRNA
Pa11g0052.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 684
- bp
- Pa11:1,499,024–1,499,707
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa11g0052
- eggNOG
- Preferred name: LOC116196613 | Seed ortholog: 3659.A0A0A0KH86 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|DK-11, TCP@3398|HJ-14
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm
- KEGG
- KO: K16221 | Pathway: 04712 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa11g0052.1-protein
derives_frommRNAPa11g0052.1
mRNAPa11g0052.1
part_ofgenePa11g0052
exon
part_ofPa11g0052.1:1mRNAPa11g0052.1
CDS
part_ofPa11g0052.1:cdsmRNAPa11g0052.1
