Feature identity
- Identifier
- Pa11g0117.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,184 bp
- Genomic location
- Pa11:2,566,678–2,577,114
- Strand
- +
West Indian T2T · mRNA
Pa11g0117.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,184
- bp
- Pa11:2,566,678–2,577,114
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa11g0117
- eggNOG
- Preferred name: LOC106755097 | Seed ortholog: 337451.A0A3S3P2B0 | COG: S | eggNOG OG: bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|B-2, bHLH-MYC_N@3193|m-7, bHLH-MYC_N@3398|AV-9
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010087 phloem or xylem histogenesis; GO:0046983 protein dimerization activity; GO:0048364 root development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa11g0117.1-protein
derives_frommRNAPa11g0117.1
mRNAPa11g0117.1
part_ofgenePa11g0117
exon
part_ofPa11g0117.1:1mRNAPa11g0117.1
exon
part_ofPa11g0117.1:10mRNAPa11g0117.1
exon
part_ofPa11g0117.1:11mRNAPa11g0117.1
exon
part_ofPa11g0117.1:2mRNAPa11g0117.1
exon
part_ofPa11g0117.1:3mRNAPa11g0117.1
exon
part_ofPa11g0117.1:4mRNAPa11g0117.1
exon
part_ofPa11g0117.1:5mRNAPa11g0117.1
exon
part_ofPa11g0117.1:6mRNAPa11g0117.1
exon
part_ofPa11g0117.1:7mRNAPa11g0117.1
exon
part_ofPa11g0117.1:8mRNAPa11g0117.1
exon
part_ofPa11g0117.1:9mRNAPa11g0117.1
CDS
part_ofPa11g0117.1:cdsmRNAPa11g0117.1
