Feature identity
- Identifier
- PaHa06g20670.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 6,105 bp
- Genomic location
- 6:54,138,435–54,192,798
- Strand
- −
Hass · mRNA
PaHa06g20670.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 6,105
- bp
- 6:54,138,435–54,192,798
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g20670
- eggNOG
- Preferred name: BTAF1 | Seed ortholog: 337451.A0A3S3NX02 | COG: S | eggNOG OG: DUF3535@2759|A-1, Helicase_C|PA5U5V@131567, Helicase_C|PA5U5V@2759, SNF2-rel_dom@131567|BD-7
- Gene Ontology
- GO:0003677 DNA binding; GO:0003712 transcription coregulator activity; GO:0003723 RNA binding; GO:0004386 helicase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008094 ATP-dependent activity, acting on DNA; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0042802 identical protein binding; GO:0140658 ATP-dependent chromatin remodeler activity; GO:1902185 positive regulation of shoot apical meristem development
- KEGG
- KO: K15192 | Pathway: 03082 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g20670.1-protein
derives_frommRNAPaHa06g20670.1
mRNAPaHa06g20670.1
part_ofgenePaHa06g20670
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54138435..54138608mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54139042..54139254mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54141886..54141968mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54142051..54142160mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54142362..54142411mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54142507..54142767mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54142857..54143087mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54143213..54143317mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54146041..54146109mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54146196..54146685mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54147311..54147849mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54153220..54153711mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54153792..54153911mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54162701..54163147mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54163238..54163663mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54163799..54163969mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54165089..54165329mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54172846..54173057mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54174086..54174154mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54174248..54174380mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54174639..54174913mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54175004..54175251mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54175405..54175513mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54183061..54183398mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54184831..54184912mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54189933..54189990mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54190064..54190278mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54192511..54192605mRNAPaHa06g20670.1
CDS
part_ofPaHa06g20670.1-CDS-6-1787993825:54192750..54192798mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54138435..54138608mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54139042..54139254mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54141886..54141968mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54142051..54142160mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54142362..54142411mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54142507..54142767mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54142857..54143087mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54143213..54143317mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54146041..54146109mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54146196..54146685mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54147311..54147849mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54153220..54153711mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54153792..54153911mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54162701..54163147mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54163238..54163663mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54163799..54163969mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54165089..54165329mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54172846..54173057mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54174086..54174154mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54174248..54174380mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54174639..54174913mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54175004..54175251mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54175405..54175513mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54183061..54183398mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54184831..54184912mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54189933..54189990mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54190064..54190278mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54192511..54192605mRNAPaHa06g20670.1
exon
part_ofPaHa06g20670.1-exon-6-1787993825:54192750..54192798mRNAPaHa06g20670.1
