Feature identity
- Identifier
- PaHa06g19700.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,937 bp
- Genomic location
- 6:51,748,875–51,777,557
- Strand
- −
Hass · mRNA
PaHa06g19700.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,937
- bp
- 6:51,748,875–51,777,557
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g19700
- eggNOG
- Preferred name: RFC1 | Seed ortholog: 337451.A0A3S4PC42 | COG: COG2256 | eggNOG OG: AAA@131567|J-4, BRCT@131567|A-1, RFC1@131567|A-1
- Gene Ontology
- GO:0000712 resolution of meiotic recombination intermediates; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003689 DNA clamp loader activity; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005634 nucleus; GO:0006974 DNA damage response; GO:0008047 enzyme activator activity; GO:0016887 ATP hydrolysis activity; GO:0019904 protein domain specific binding; GO:0040029 epigenetic regulation of gene expression; GO:0043565 sequence-specific DNA binding; GO:0051321 meiotic cell cycle; GO:0061860 DNA clamp unloader activity; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K10754 | Pathway: 03030, 03410, 03420, 03430 | BRITE: 00001, 03032, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g19700.1-protein
derives_frommRNAPaHa06g19700.1
mRNAPaHa06g19700.1
part_ofgenePaHa06g19700
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51748875..51749008mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51749892..51749951mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51751474..51751720mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51752945..51753037mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51753139..51753211mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51755488..51755612mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51761827..51761866mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51761963..51762144mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51765043..51765133mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51767667..51767836mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51770748..51770801mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51771351..51771558mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51771643..51771764mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51771918..51772106mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51772219..51772379mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51772501..51772649mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51772737..51772798mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51772880..51772955mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51773659..51773726mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51773837..51774328mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51777301..51777438mRNAPaHa06g19700.1
CDS
part_ofPaHa06g19700.1-CDS-6-1787993825:51777555..51777557mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51748875..51749008mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51749892..51749951mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51751474..51751720mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51752945..51753037mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51753139..51753211mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51755488..51755612mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51761827..51761866mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51761963..51762144mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51765043..51765133mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51767667..51767836mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51770748..51770801mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51771351..51771558mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51771643..51771764mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51771918..51772106mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51772219..51772379mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51772501..51772649mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51772737..51772798mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51772880..51772955mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51773659..51773726mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51773837..51774328mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51777301..51777438mRNAPaHa06g19700.1
exon
part_ofPaHa06g19700.1-exon-6-1787993825:51777555..51777557mRNAPaHa06g19700.1
