Feature identity
- Identifier
- PaHa06g19650.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 618 bp
- Genomic location
- 6:51,687,521–51,688,138
- Strand
- −
Hass · mRNA
PaHa06g19650.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 618
- bp
- 6:51,687,521–51,688,138
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g19650
- eggNOG
- Preferred name: ERF4 | Seed ortholog: 337451.A0A3S3N538 | eggNOG OG: AP2@131567|DU-11, AP2@33090|uY-21, AP2@58023|AjE-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009723 response to ethylene; GO:0009737 response to abscisic acid; GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway; GO:0009873 ethylene-activated signaling pathway; GO:0010087 phloem or xylem histogenesis; GO:0010105 negative regulation of ethylene-activated signaling pathway; GO:0010629 negative regulation of gene expression; GO:0016604 nuclear body; GO:0045892 negative regulation of DNA-templated transcription; GO:0051301 cell division; GO:0071456 cellular response to hypoxia
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g19650.1-protein
derives_frommRNAPaHa06g19650.1
mRNAPaHa06g19650.1
part_ofgenePaHa06g19650
CDS
part_ofPaHa06g19650.1-CDS-6-1787993825:51687521..51688138mRNAPaHa06g19650.1
exon
part_ofPaHa06g19650.1-exon-6-1787993825:51687521..51688138mRNAPaHa06g19650.1
