Pa11g1790.2

West Indian T2T · mRNA

Pa11g1790.2

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,049
bp
Pa11:46,007,700–46,015,975
genomic location
Record overview

Feature identity

Identifier
Pa11g1790.2
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
2,049 bp
Genomic location
Pa11:46,007,700–46,015,975
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa11g1790

eggNOG
Preferred name: ARF1 | Seed ortholog: 337451.A0A443PPQ4 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Amh-25, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|BT-10, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BlQ-27
Gene Ontology
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0008219 cell death; GO:0009733 response to auxin; GO:0010150 leaf senescence; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

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