Feature identity
- Identifier
- PaHa06g18970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,269 bp
- Genomic location
- 6:49,656,703–49,695,215
- Strand
- −
Hass · mRNA
PaHa06g18970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,269
- bp
- 6:49,656,703–49,695,215
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g18970
- eggNOG
- Preferred name: LOC104599735 | Seed ortholog: 337451.A0A443PCN4 | COG: S | eggNOG OG: UNK.EQ9O@2759|A-1
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009910 negative regulation of flower development; GO:0042803 protein homodimerization activity; GO:0046982 protein heterodimerization activity
- KEGG
- KO: K27810 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g18970.1-protein
derives_frommRNAPaHa06g18970.1
mRNAPaHa06g18970.1
part_ofgenePaHa06g18970
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49656703..49656792mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49658256..49658293mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49658367..49658421mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49659578..49659631mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49659745..49659902mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49671641..49672095mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49678085..49678211mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49683783..49683883mRNAPaHa06g18970.1
CDS
part_ofPaHa06g18970.1-CDS-6-1787993825:49695025..49695215mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49656703..49656792mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49658256..49658293mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49658367..49658421mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49659578..49659631mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49659745..49659902mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49671641..49672095mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49678085..49678211mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49683783..49683883mRNAPaHa06g18970.1
exon
part_ofPaHa06g18970.1-exon-6-1787993825:49695025..49695215mRNAPaHa06g18970.1
