West Indian T2T · mRNA

Pa11g1736.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

672
bp
Pa11:45,368,449–45,387,561
genomic location
Record overview

Feature identity

Identifier
Pa11g1736.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
672 bp
Genomic location
Pa11:45,368,449–45,387,561
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: AG2 | Seed ortholog: 337451.A0A3S3R0U7 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|BXL-27, SRF-TF@35493|jY-20
Gene Ontology
GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010214 seed coat development; GO:0046983 protein dimerization activity; GO:0048316 seed development; GO:0048440 carpel development; GO:0048481 plant ovule development; GO:0051302 regulation of cell division; GO:0071669 plant-type cell wall organization or biogenesis; GO:0080060 integument development; GO:0080155 regulation of double fertilization forming a zygote and endosperm; GO:0090376 seed trichome differentiation; GO:0090397 stigma papilla
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.