Feature identity
- Identifier
- Pa12g0001.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 423 bp
- Genomic location
- Pa12:20,518–20,940
- Strand
- −
West Indian T2T · mRNA
Pa12g0001.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 423
- bp
- Pa12:20,518–20,940
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g0001
- eggNOG
- Preferred name: LOC101513688 | Seed ortholog: 3818.A0A444XUQ0 | COG: COG3239 | eggNOG OG: FA_desaturase@131567|Bc-9, FA_desaturase@1437183|JKv-35
- Gene Ontology
- GO:0005575 cellular_component; GO:0005635 nuclear envelope; GO:0005783 endoplasmic reticulum; GO:0005829 cytosol; GO:0006631 fatty acid metabolic process; GO:0006633 fatty acid biosynthetic process; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0016491 oxidoreductase activity; GO:0016720 acyl-lipid Delta(12)-acetylenase activity; GO:0042389 omega-3 fatty acid desaturase activity; GO:0043936 asexual sporulation resulting in formation of a cellular spore; GO:0050183 phosphatidylcholine 12-monooxygenase activity; GO:0071398 cellular response to fatty acid; GO:0102517 oleate 12-hydroxylase activity
- KEGG
- EC: ec:1.14.19.22, ec:1.14.19.6 | KO: K10256 | Pathway: 01040, 01100, 01212 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g0001.1-protein
derives_frommRNAPa12g0001.1
mRNAPa12g0001.1
part_ofgenePa12g0001
exon
part_ofPa12g0001.1:1mRNAPa12g0001.1
CDS
part_ofPa12g0001.1:cdsmRNAPa12g0001.1
