Feature identity
- Identifier
- PaHa06g16730.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 540 bp
- Genomic location
- 6:33,986,189–33,987,343
- Strand
- +
Hass · mRNA
PaHa06g16730.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 540
- bp
- 6:33,986,189–33,987,343
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa06g16730
- eggNOG
- Preferred name: HDG11 | Seed ortholog: 337451.A0A3S4NBX2 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@35493|CIj-25, START@131567|e-5, START@2759|CM-9!, START@3398|ABq-20, START@35493|Xd-16
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009828 plant-type cell wall loosening; GO:0010091 trichome branching; GO:0030154 cell differentiation; GO:0048497 maintenance of floral organ identity
- KEGG
- KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa06g16730.1-protein
derives_frommRNAPaHa06g16730.1
mRNAPaHa06g16730.1
part_ofgenePaHa06g16730
CDS
part_ofPaHa06g16730.1-CDS-6-1787993825:33986189..33986428mRNAPaHa06g16730.1
CDS
part_ofPaHa06g16730.1-CDS-6-1787993825:33986544..33986605mRNAPaHa06g16730.1
CDS
part_ofPaHa06g16730.1-CDS-6-1787993825:33987106..33987343mRNAPaHa06g16730.1
exon
part_ofPaHa06g16730.1-exon-6-1787993825:33986189..33986428mRNAPaHa06g16730.1
exon
part_ofPaHa06g16730.1-exon-6-1787993825:33986544..33986605mRNAPaHa06g16730.1
exon
part_ofPaHa06g16730.1-exon-6-1787993825:33987106..33987343mRNAPaHa06g16730.1
