Feature identity
- Identifier
- Pa12g1056.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 675 bp
- Genomic location
- Pa12:27,010,886–27,024,689
- Strand
- −
West Indian T2T · mRNA
Pa12g1056.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 675
- bp
- Pa12:27,010,886–27,024,689
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g1056
- eggNOG
- Preferred name: SCR | Seed ortholog: 214687.M0RTT7 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|NC-17, GRAS@3398|WW-19, GRAS@4640|Bps-29
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008356 asymmetric cell division; GO:0009630 gravitropism; GO:0009956 radial pattern formation; GO:0043565 sequence-specific DNA binding; GO:0045454 cell redox homeostasis; GO:0048364 root development; GO:0048366 leaf development; GO:0051457 maintenance of protein location in nucleus; GO:0090610 bundle sheath cell fate specification
- KEGG
- KO: K27742 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g1056.1-protein
derives_frommRNAPa12g1056.1
mRNAPa12g1056.1
part_ofgenePa12g1056
exon
part_ofPa12g1056.1:1mRNAPa12g1056.1
exon
part_ofPa12g1056.1:2mRNAPa12g1056.1
exon
part_ofPa12g1056.1:3mRNAPa12g1056.1
CDS
part_ofPa12g1056.1:cdsmRNAPa12g1056.1
