Feature identity
- Identifier
- Pa12g1572.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,055 bp
- Genomic location
- Pa12:35,910,347–35,914,318
- Strand
- −
West Indian T2T · mRNA
Pa12g1572.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,055
- bp
- Pa12:35,910,347–35,914,318
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa12g1572
- eggNOG
- Preferred name: ARF18 | Seed ortholog: 337451.A0A443Q0V6 | COG: S | eggNOG OG: Auxin_resp@131221|AX-8, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3398|Gd-14, B3@131221|AHw-20, B3@131567|A-1*, B3@3193|BOp-25, B3@33090|Id-12, B3@3398|CGu-29
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007389 pattern specification process; GO:0009734 auxin-activated signaling pathway; GO:0009738 abscisic acid-activated signaling pathway; GO:0009743 response to carbohydrate; GO:0010154 fruit development; GO:0031540 regulation of anthocyanin biosynthetic process; GO:0035198 miRNA binding; GO:0048366 leaf development; GO:0048441 petal development; GO:0048442 sepal development; GO:0048589 developmental growth; GO:0048829 root cap development; GO:0051301 cell division
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa12g1572.2-protein
derives_frommRNAPa12g1572.2
exon
part_ofPa12g1572.1:1mRNAPa12g1572.2
exon
part_ofPa12g1572.1:2mRNAPa12g1572.2
mRNAPa12g1572.2
part_ofgenePa12g1572
exon
part_ofPa12g1572.2:4mRNAPa12g1572.2
CDS
part_ofPa12g1572.2:cdsmRNAPa12g1572.2
